Click on the GCGR cell line ID to view the datasheet, which also has cell images, CNV data and STR profile
Click on the cell line profiling data columns for links to the data held at ENA and Array Express repositories
| GCGR Cell line ID | WHO classification | Primary (P) or recurrent tumour |
GBM Transcriptional subclass | Cell line profiling data | Approx. cell doubling time (hrs) |
MGMT promoter methylation methylated (M)/unmethylated (UnM) |
Tumour formation following transplant of GFP-Luc cell line |
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|---|---|---|---|---|---|---|---|---|---|---|
| Classical/Proneural/Mesenchymal | MesImm/NonMesImm | Transcriptome | Methylome | Genome | ||||||
| GCGR-E1 | glioblastoma, IDH wildtype | P | not assigned | MESImm | yes | yes | yes | 120 | UnM | Yes (~8 months) |
| GCGR-E3 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 84 | M | Yes (~10 months) |
| GCGR-E4 | astrocytoma_high grade, IDH mutant | P | not GBM, astrocytoma_high grade, IDH mutant | yes | yes | yes | 336 | M | Not attempted | |
| GCGR-E13 | glioblastoma, IDH wildtype | P | classical | MESImm | yes | yes | yes | 93.6 | UnM | Yes (~5 months) |
| GCGR-E15 | glioblastoma, IDH wildtype | P | not assigned | Non-MESImm | yes | yes | yes | 140 | M | Yes (~4 months) |
| GCGR-E17 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 120 | UnM | Yes (~7 months) |
| GCGR-E20 | glioblastoma, IDH wildtype | P | proneural | equal | yes | yes | yes | 159 | M | Yes (~4 months) |
| GCGR-E21 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 232 | UnM | 40% mortality at 1 year |
| GCGR-E22 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 151 | UnM | Yes (~10 months) |
| GCGR-E24 | glioblastoma, IDH wildtype | P | proneural | Non-MESImm | yes | yes | yes | 144 | M | Yes (~8 months) |
| GCGR-E25 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 202 | UnM | Yes (~8 months) |
| GCGR-E26 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 168 | UnM | Yes (~9 months) |
| GCGR-E27 | glioblastoma, IDH wildtype | P | not assigned | MESImm | yes | yes | yes | 79 | UnM | No lethal brain tumours at 1 year (cells on top of brain ~8 months) |
| GCGR-E28 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 101 | M | Yes (~6 months) |
| GCGR-E30 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 154 | UnM | Yes (~11 months) |
| GCGR-E31 | glioblastoma, IDH wildtype | P | proneural | Non-MESImm | yes | yes | yes | 110 | M | Yes (~10 months) |
| GCGR-E34 | glioblastoma, IDH wildtype | P | proneural | Non-MESImm | yes | yes | yes | 144 | UnM | No lethal brain tumours at 1 year |
| GCGR-E35 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 73 | UnM | Yes (~9 months) |
| GCGR-E37 | glioblastoma, IDH wildtype | recurrent | mesenchymal | MESImm | yes | yes | yes | 84 | UnM | Yes (~4 months) |
| GCGR-E39 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 184 | M | No lethal brain tumours at 1 year |
| GCGR-E43 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 140 | M | Yes (~3 months) |
| GCGR-E51 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 88 | UnM | Yes (~10 months) |
| GCGR-E53 | glioblastoma, IDH wildtype | P | proneural | Non-MESImm | yes | yes | yes | 108 | UnM | Yes (~7 months) |
| GCGR-E54 | glioblastoma, IDH wildtype | P | proneural | Non-MESImm | yes | yes | yes | 109 | M | 20% mortality at 5 months |
| GCGR-E55 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 65 | UnM | Yes (~4 months) |
| GCGR-E56 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 73 | M | Yes (~5 months) |
| GCGR-E57 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 63 | M | Yes (~9 months) |
| GCGR-E58 | astrocytoma_high grade, IDH mutant | P | not GBM, astrocytoma_high grade, IDH mutant | yes | yes | 269 | M | Not attempted | ||
| GCGR-E62 | glioblastoma, IDH wildtype | recurrent | not assigned | equal | yes | yes | yes | 149 | M | Yes (~6 months) |
| GCGR-E63 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 106 | UnM | Yes (~4 months) |
| GCGR-E64 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 132 | M | No lethal brain tumours at 1 year |
| GCGR-E65 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 134 | UnM | No lethal brain tumours at 1 year |
| GCGR-L1 | glioblastoma, IDH wildtype | P | not assigned | Non-MESImm | yes | yes | yes | 108 | UnM | Yes (~4 months) |
| GCGR-L2 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 202 | M | Not attempted |
| GCGR-L3 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 186 | UnM | Yes (~3 months) |
| GCGR-L4 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 144 | UnM | Not attempted |
| GCGR-L5 | glioblastoma, IDH wildtype | recurrent | classical | Non-MESImm | yes | yes | yes | 128 | UnM | Yes (~4 months) |
| GCGR-L6 | glioblastoma, IDH wildtype | P | proneural | Non-MESImm | yes | yes | yes | 303 | M | Not attempted |
| GCGR-L7 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes (no matching normal) | 220 | UnM | Yes (~6 months) |
| GCGR-L8 | astrocytoma_low grade, IDH mutant | P | not GBM, astrocytoma_high grade, IDH mutant | yes | yes | yes | 505 | M | No tumours at 1 year | |
| GCGR-L10 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 77 | UnM | Yes (~8 months) |
| GCGR-L11 | glioblastoma, IDH wildtype | P | not assigned | equal | yes | yes | yes (no matching normal) | 237 | UnM | Yes (~9 months) |
| GCGR-L12 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 138 | UnM | No lethal brain tumours at 1 year |
| GCGR-L13 | glioblastoma, IDH wildtype | P | mesenchymal | equal | yes | yes | yes | 160 | UnM | No brain tumours at 1 year (cells on top of brain ~5month) |
| GCGR-L14 | glioblastoma, IDH wildtype | P | not assigned | MESImm | yes | yes | yes | 125 | UnM | Not attempted |
| GCGR-L15 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 160 | M | Yes (~10 months) |
| GCGR-L16 | astrocytoma_high grade, IDH mutant | P | not GBM, astrocytoma_high grade, IDH mutant | yes | yes | yes (no matching normal) | 378 | M | Not attempted | |
| GCGR-L17 | glioblastoma, IDH wildtype | P | proneural | Non-MESImm | yes | yes | yes | 134 | M | Not attempted |
| GCGR-L18 | glioblastoma, IDH wildtype | P | not assigned | equal | yes | yes | yes | 118 | M | No lethal brain tumours at 1 year |
| GCGR-L19 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 147 | UnM | Not attempted |
| GCGR-L20 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 147 | UnM | No lethal brain tumours at 1 year |
| GCGR-L21 | glioblastoma, IDH wildtype | recurrent | classical | Non-MESImm | yes | yes | yes | 134 | UnM | Yes (~6 months) |
| GCGR-L22 | glioblastoma, IDH wildtype | P | not assigned | equal | yes | yes | yes (no matching normal) | 278 | M | Yes (~10 months) |
| GCGR-L23 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | yes | 285 | UnM | Not attempted |
| GCGR-L24 | glioblastoma, IDH wildtype | P | not assigned | MESImm | yes | yes | yes | 134 | UnM | Yes (~6 months) |
| GCGR-L25 | glioblastoma, IDH wildtype | P | mesenchymal | MESImm | yes | yes | 160 | UnM | No lethal brain tumours at 1 year | |
| GCGR-L26 | glioblastoma, IDH wildtype | P | classical | Non-MESImm | yes | yes | yes | 340 | M | Yes (~5 months) |